Runners Swap

[DG]

Ok, I see I was not clear on what I was asking so let me rephrase.

Bottom 7th, tie game, 0 outs.

Batter hits a double, he is a slow runner. Next batter is fastest player on the team and he is intentional walked. Defensive coach goes to mound to talk with defense. Offensive coach calls runners over for discussion. When play resumes slow runner is on first and fast runner is on second. Batter hits first pitch for a hit, fast runner scores. Defensive coach comes out to complain that runners swapped.

I think we established two outs per FED interp, and some ejections (opinions vary on how many).

Now what do you do with the base hit that happened before the discovery?