[Adam]

Good grief. Here’s what you do. The calling official’s call stands. In this case, the calling official determined the penalty for the foul was bonus free throws. The R decided to overrule that call and have a spot throw-in instead. He overruled the other official, this is not allowed by rule.
In this case, when the officials disagree, the calling official makes the choice. It’s the same thing every time the officials disagree (OOB, fouls, etc.); except in one instance.