First of all Babe Ruth, Little League and Official Baseball Rules published by
The Sporting News are all different codes. There are only slight differences, but differences none the less.
Secondly, the batter/runner in this sitch (if I'm understanding your original post) never accepted his award of first base. In other words, he chose not to run the bases, thus abandoned his effort to run the bases. He shall be declared out. No run scores. Game continues.
Find the OBR at
http://mlb.mlb.com/NASApp/mlb/mlb/of...info/index.jsp
On the left side of the page.